May 1, 2024

Extreme Genome Shrinkage: This Parasitic Plant Convinces Hosts To Grow Into Its Own Flesh

Balanophora shed one-third of its genes as it developed into an uber-streamlined parasitic plant, according to brand-new research by a group led by scientists at BGI Research, and consisting of botanists from the University of British Columbia. Credit: Ze Wei, Plant Photo Bank of China, Nature Plants
You might easily error them for fungis growing around tree roots if you happen to come across plants of the Balanophoraceae household in a corner of a forest. Their mushroom-like structures are really inflorescences, composed of minute flowers.
However unlike some other parasitic plants that extend a haustorium into host tissue to take nutrients, Balanophora causes the vascular system of their host plant to grow into a bulb, forming an unique underground organ with combined host-parasite tissue. This chimeric root is the interface where Balanophora takes nutrients from its host plant.
Study on Extreme Parasitic Plants
How these subtropical extreme parasitic plants progressed into their existing form piqued the interest of Dr. Xiaoli Chen. Dr. Chen is a researcher with BGI Research and the lead author of a new research study published recently in the journal Nature Plants

The research study also exposed a loss of genes involved in other key biological processes– root advancement, nitrogen absorption, and guideline of flowering advancement. The parasites have shed or compacted a large portion of the gene families typically found in green plants– the large sets of duplicated gene plants that tend to perform associated biological functions. This supports the idea that the parasites maintain only those genes or gene copies that are essential.
” That said, there are most likely instances where the gene loss was really advantageous, rather than reflecting a simple loss of function. It might help them to preserve physiological synchronization with the host plants.

Dr. Chen and coworkers– including University of British Columbia botanist Dr. Sean Graham– compared the genomes of Balanophora and Sapria, another severe parasitic plant in the household Rafflesiaceae that has a very various vegetative body.
The study revealed Sapria and Balanophora have actually lost 38 percent and 28 percent of their genomes respectively, while developing to become holoparasitic– record shrinkages for flowering plants.
Balanophora shed one third of its genes as it developed into an uber-streamlined parasitic plant, according to brand-new research study by a team led by scientists at BGI Research, and including botanists from the University of British Columbia. Credit: Xiaoli Chen, BGI Research, Nature Plants.
Gene Losses and Convergent Evolution
” The level of comparable, but independent gene losses observed in Balanophora and Sapria stands out,” said Dr. Chen. “It indicates an extremely strong merging in the genetic evolution of holoparasitic lineages, despite their outwardly unique biography and looks, and in spite of their having actually progressed from different groups of photosynthetic plants.”
The researchers found a near-total loss of genes associated with photosynthesis in both Balanophora and Sapria, as would be expected with the loss of photosynthestic capability.
Nevertheless, the study also exposed a loss of genes involved in other key biological procedures– root advancement, nitrogen absorption, and guideline of blooming advancement. The parasites have actually shed or compacted a large portion of the gene households normally found in green plants– the big sets of duplicated gene plants that tend to perform associated biological functions. This supports the concept that the parasites maintain only those genes or gene copies that are important.
A lot of astonishingly, genes associated with the synthesis of a significant plant hormonal agent, abscisic acid (ABA), which is accountable for plant tension reactions and signaling, have been lost in parallel in Balanophora and Sapria. Regardless of this, the scientists still tape-recorded accumulation of the ABA hormone in flowering stems of Balanophora, and discovered that genes associated with the response to ABA signaling are still kept in the parasites.
Insights and Future Directions
” The majority of the lost genes in Balanophora are most likely connected to functions essential in green plants, which have actually ended up being functionally unneeded in the parasites,” stated Dr. Graham.
” That stated, there are most likely circumstances where the gene loss was really useful, rather than showing an easy loss of function. The loss of their whole ABA biosynthesis pathway might be a great example. It might help them to preserve physiological synchronization with the host plants. This requires to be evaluated in the future.”
Dr. Huan Liu, a researcher at BGI Research, highlighted the significance of the research study in the context of 10KP– a task to sequence the genomes of 10,000 plant species.
” The research study of parasitic plants deepens our understanding of dramatic genomic alterations and the complicated interactions between parasitic plants and their hosts. The genomic data provides valuable insights into the development and genetic mechanisms behind the reliance of parasitic plants on their hosts, and how they manipulate host plants to survive.”
Referral: “Balanophora genomes display massively convergent advancement with other severe holoparasites and provide novel insights into parasite– host interactions” by Xiaoli Chen, Dongming Fang, Yuxing Xu, Kunyu Duan, Satoko Yoshida, Shuai Yang, Sunil Kumar Sahu, Hui Fu, Xuanmin Guang, Min Liu, Chenyu Wu, Yang Liu, Weixue Mu, Yewen Chen, Yannan Fan, Fang Wang, Shufeng Peng, Dishen Shi, Yayu Wang, Runxian Yu, Wen Zhang, Yuqing Bai, Zhong-Jian Liu, Qiaoshun Yan, Xin Liu, Xun Xu, Huanming Yang, Jianqiang Wu, Sean W. Graham and Huan Liu, 21 September 2023, Nature Plants.DOI: 10.1038/ s41477-023-01517-7.